Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate phosphatase | C3433_07470 | Not Available | Negative | 1596804 - 1597469 | 24557.5 |
| ncs2 family permease | C3433_07475 | Not Available | Positive | 1597637 - 1598974 | 46660.5 |
| histidine ammonia-lyase | C3433_07480 | Not Available | Positive | 1599282 - 1600988 | 61616.6 |
| flavocytochrome c | C3433_07485 | Not Available | Positive | 1600994 - 1602565 | 56015.2 |
| cytochrome c | C3433_07490 | Not Available | Positive | 1602567 - 1602980 | 15012.7 |
| thiosulfate reductase cytochrome b subunit | C3433_07495 | Not Available | Positive | 1602989 - 1604593 | 58358.7 |
| hypothetical protein | C3433_07500 | Not Available | Negative | 1604634 - 1606031 | 52735.2 |
| nad(p)h-dependent oxidoreductase | C3433_07505 | Not Available | Negative | 1606312 - 1606878 | 20269.6 |
| hypothetical protein | C3433_07510 | Not Available | Negative | 1606909 - 1607655 | 27541.0 |
| hth-type transcriptional regulator yidz | C3433_07515 | Not Available | Negative | 1607822 - 1608781 | 36938.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

