Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator asnc | C3433_07370 | Not Available | Positive | 1576020 - 1576478 | 16952.7 |
| fmn-binding protein mioc | C3433_07375 | Not Available | Positive | 1576567 - 1577016 | 16235.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | C3433_07380 | Not Available | Positive | 1577389 - 1579278 | 69841.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | C3433_07385 | Not Available | Positive | 1579385 - 1580008 | 23286.3 |
| atp f0f1 synthase subunit i | C3433_07390 | Not Available | Positive | 1580623 - 1581003 | 13666.7 |
| f0f1 atp synthase subunit a | C3433_07395 | Not Available | Positive | 1581011 - 1581826 | 30383.2 |
| atp synthase subunit c | C3433_07400 | Not Available | Positive | 1581873 - 1582112 | 8238.67 |
| atp synthase subunit b | C3433_07405 | Not Available | Positive | 1582172 - 1582642 | 17264.9 |
| f0f1 atp synthase subunit delta | C3433_07410 | Not Available | Positive | 1582657 - 1583190 | 19441.3 |
| f0f1 atp synthase subunit alpha | C3433_07415 | Not Available | Positive | 1583203 - 1584744 | 55305.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

