Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rbsr | C3433_07320 | Not Available | Negative | 1563656 - 1564648 | 36650.2 |
| ribokinase | C3433_07325 | Not Available | Negative | 1564652 - 1565581 | 31994.9 |
| ribose abc transporter substrate-binding protein rbsb | C3433_07330 | Not Available | Negative | 1565723 - 1566613 | 30939.3 |
| ribose abc transporter permease | C3433_07335 | Not Available | Negative | 1566638 - 1567603 | 33341.9 |
| ribose abc transporter atp-binding protein rbsa | C3433_07340 | Not Available | Negative | 1567609 - 1569114 | 55083.2 |
| d-ribose pyranase | C3433_07345 | Not Available | Negative | 1569122 - 1569541 | 15365.5 |
| low affinity potassium transporter kup | C3433_07350 | Not Available | Negative | 1569734 - 1571602 | 69360.4 |
| atpase rava | C3433_07355 | Not Available | Positive | 1571931 - 1573427 | 56628.3 |
| atpase rava stimulator viaa | C3433_07360 | Not Available | Positive | 1573421 - 1574872 | 55870.7 |
| aspartate--ammonia ligase | C3433_07365 | Not Available | Negative | 1574876 - 1575868 | 36586.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

