Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase/prephenate dehydrogenase | C3433_07260 | Not Available | Positive | 1551722 - 1552843 | 41913.7 |
| bifunctional chorismate mutase/prephenate dehydratase | C3433_07265 | Not Available | Negative | 1552938 - 1554098 | 42963.6 |
| hypothetical protein | C3433_07270 | Not Available | Negative | 1554198 - 1554245 | 1886.4 |
| ribosome-associated translation inhibitor raia | C3433_07275 | Not Available | Negative | 1554349 - 1554687 | 12696.2 |
| outer membrane protein assembly factor bamd | C3433_07280 | Not Available | Negative | 1554957 - 1555694 | 27769.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | C3433_07285 | Not Available | Positive | 1555826 - 1556806 | 37193.9 |
| peptidoglycan editing factor pgef | C3433_07290 | Not Available | Positive | 1556803 - 1557534 | 26345.3 |
| atp-dependent chaperone clpb | C3433_07295 | Not Available | Positive | 1557664 - 1560237 | 95461.5 |
| gntr family transcriptional regulator | C3433_07310 | Not Available | Positive | 1561557 - 1562261 | 26586.2 |
| multidrug transporter subunit mdtd | C3433_07315 | Not Available | Positive | 1562263 - 1563690 | 51495.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

