Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | C3433_07210 | Not Available | Positive | 1543899 - 1545260 | 49746.4 |
| 30s ribosomal protein s16 | C3433_07215 | Not Available | Positive | 1545515 - 1545763 | 9165.04 |
| ribosome maturation factor rimm | C3433_07220 | Not Available | Positive | 1545782 - 1546330 | 20473.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C3433_07225 | Not Available | Positive | 1546375 - 1547142 | 28438.0 |
| 50s ribosomal protein l19 | C3433_07230 | Not Available | Positive | 1547182 - 1547529 | 13134.0 |
| hypothetical protein | C3433_07235 | Not Available | Negative | 1547660 - 1548142 | 17465.8 |
| diguanylate cyclase | C3433_07240 | Not Available | Negative | 1548155 - 1549381 | 45940.2 |
| duf4154 domain-containing protein | C3433_07245 | Not Available | Negative | 1549374 - 1549892 | 19031.2 |
| hypothetical protein | C3433_07250 | Not Available | Negative | 1550051 - 1550425 | 13759.0 |
| 3-deoxy-7-phosphoheptulonate synthase | C3433_07255 | Not Available | Positive | 1550641 - 1551711 | 38793.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

