Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_07005 | Not Available | Negative | 1487558 - 1488328 | 28394.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | C3433_07010 | Not Available | Positive | 1489295 - 1496233 | 236854.0 |
| hypothetical protein | C3433_07015 | Not Available | Positive | 1496270 - 1497784 | 57602.1 |
| hypothetical protein | C3433_07020 | Not Available | Negative | 1497843 - 1498199 | 12580.5 |
| hypothetical protein | C3433_07025 | Not Available | Positive | 1498703 - 1499503 | 30353.8 |
| hypothetical protein | C3433_07030 | Not Available | Negative | 1499506 - 1499691 | 6896.44 |
| toxin | C3433_07035 | Not Available | Negative | 1500100 - 1500429 | 12432.0 |
| antitoxin yeeu | C3433_07040 | Not Available | Negative | 1500466 - 1500789 | 11961.2 |
| hypothetical protein | C3433_07045 | Not Available | Negative | 1500802 - 1501272 | 17732.5 |
| duf945 domain-containing protein | C3433_07050 | Not Available | Negative | 1501343 - 1502161 | 31174.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

