Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | C3433_06955 | Not Available | Positive | 1475294 - 1477219 | 70252.6 |
| inositol 2-dehydrogenase | C3433_06960 | Not Available | Positive | 1477563 - 1478549 | 36250.1 |
| sugar abc transporter substrate-binding protein | C3433_06965 | Not Available | Positive | 1478588 - 1479517 | 32844.5 |
| d-xylose abc transporter atp-binding protein | C3433_06970 | Not Available | Positive | 1479569 - 1481116 | 56418.1 |
| sugar abc transporter permease | C3433_06975 | Not Available | Positive | 1481128 - 1482156 | 36405.8 |
| myo-inositol 2-dehydrogenase | C3433_06980 | Not Available | Positive | 1482165 - 1483298 | 41061.3 |
| 5-dehydro-2-deoxygluconokinase | C3433_06985 | Not Available | Positive | 1483311 - 1485215 | 70013.8 |
| myo-inosose-2 dehydratase | C3433_06990 | Not Available | Positive | 1485230 - 1486120 | 32753.0 |
| 5-deoxy-glucuronate isomerase | C3433_06995 | Not Available | Positive | 1486130 - 1486948 | 30738.2 |
| hypothetical protein | C3433_07000 | Not Available | Negative | 1487056 - 1487568 | 18512.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

