Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | C3433_06905 | Not Available | Positive | 1461863 - 1465105 | 120998.0 |
| hypothetical protein | C3433_06910 | Not Available | Negative | 1465179 - 1465805 | 21895.5 |
| acid-resistance protein | C3433_06915 | Not Available | Positive | 1466086 - 1466682 | 22267.0 |
| abc transporter substrate-binding protein | C3433_06920 | Not Available | Positive | 1466682 - 1467029 | 12726.8 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | C3433_06925 | Not Available | Negative | 1467239 - 1470355 | 112386.0 |
| efflux transporter periplasmic adaptor subunit | C3433_06930 | Not Available | Negative | 1470384 - 1471541 | 41671.2 |
| hypothetical protein | C3433_06935 | Not Available | Negative | 1471819 - 1472385 | 21062.3 |
| hypothetical protein | C3433_06940 | Not Available | Negative | 1472460 - 1472654 | 7274.15 |
| fe-s cluster assembly protein hesb | C3433_06945 | Not Available | Negative | 1472629 - 1473483 | 31495.5 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C3433_06950 | Not Available | Positive | 1473777 - 1475282 | 54147.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

