Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular biosynthesis protein | C3433_06805 | Not Available | Positive | 1437662 - 1438948 | 49424.1 |
| capsular biosynthesis protein | C3433_06810 | Not Available | Positive | 1438950 - 1439507 | 20296.4 |
| capsular biosynthesis protein | C3433_06815 | Not Available | Positive | 1439510 - 1441639 | 78268.2 |
| capsular biosynthesis protein | C3433_06820 | Not Available | Positive | 1441636 - 1442847 | 45798.8 |
| capsular biosynthesis protein | C3433_06825 | Not Available | Positive | 1442844 - 1444214 | 50646.6 |
| glycosyl transferase | C3433_06830 | Not Available | Positive | 1444219 - 1445208 | 36901.7 |
| glycosyltransferase family 1 protein | C3433_06835 | Not Available | Positive | 1445223 - 1446434 | 45114.7 |
| phosphonate abc transporter substrate-binding protein | C3433_06840 | Not Available | Positive | 1446436 - 1447548 | 41153.1 |
| hypothetical protein | C3433_06845 | Not Available | Positive | 1447551 - 1447958 | 15823.4 |
| duf4832 domain-containing protein | C3433_06850 | Not Available | Positive | 1447990 - 1449381 | 51870.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

