Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase | C3433_06755 | Not Available | Negative | 1425550 - 1426374 | 30983.7 |
| laci family transcriptional regulator | C3433_06760 | Not Available | Positive | 1426668 - 1428887 | 82366.5 |
| short chain dehydrogenase | C3433_06765 | Not Available | Negative | 1428943 - 1429545 | 21246.3 |
| lysr family transcriptional regulator | C3433_06770 | Not Available | Positive | 1429644 - 1430534 | 33041.4 |
| tripartite tricarboxylate transporter tcta | C3433_06775 | Not Available | Negative | 1430626 - 1432140 | 52670.1 |
| tripartite tricarboxylate transporter tctb family protein | C3433_06780 | Not Available | Negative | 1432151 - 1432585 | 15900.2 |
| tricarboxylic transporter | C3433_06785 | Not Available | Negative | 1432600 - 1433577 | 35530.9 |
| transcriptional regulator tctd | C3433_06790 | Not Available | Positive | 1433731 - 1434405 | 25242.7 |
| histidine kinase | C3433_06795 | Not Available | Positive | 1434392 - 1435816 | 53266.9 |
| undecaprenyl-phosphate glucose phosphotransferase | C3433_06800 | Not Available | Positive | 1436257 - 1437672 | 53938.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

