Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | C3433_06700 | Not Available | Positive | 1415529 - 1415978 | 16035.9 |
| transcriptional regulator | C3433_06705 | Not Available | Negative | 1415991 - 1416677 | 26059.7 |
| gaba permease | C3433_06710 | Not Available | Negative | 1416723 - 1418123 | 50977.9 |
| hypothetical protein | C3433_06715 | Not Available | Negative | 1418098 - 1418298 | 6822.26 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C3433_06720 | Not Available | Negative | 1418271 - 1419554 | 45765.3 |
| succinate-semialdehyde dehydrogenase i | C3433_06725 | Not Available | Negative | 1419580 - 1421028 | 51801.0 |
| l-2-hydroxyglutarate oxidase | C3433_06730 | Not Available | Negative | 1421052 - 1422320 | 45975.6 |
| carbon starvation induced protein | C3433_06735 | Not Available | Negative | 1422340 - 1423317 | 37190.3 |
| transporter | C3433_06745 | Not Available | Negative | 1423558 - 1424271 | 25896.2 |
| mfs transporter | C3433_06750 | Not Available | Negative | 1424303 - 1425538 | 45430.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

