Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrdh-redoxin | C3433_06650 | Not Available | Negative | 1409523 - 1409768 | 9200.04 |
| alkylhydroperoxidase | C3433_06655 | Not Available | Negative | 1410048 - 1410479 | 16039.3 |
| dna-binding transcriptional regulator | C3433_06660 | Not Available | Positive | 1410570 - 1411904 | 49848.2 |
| hypothetical protein | C3433_06665 | Not Available | Positive | 1412028 - 1412378 | 13243.7 |
| l-alanine exporter alae | C3433_06670 | Not Available | Negative | 1412415 - 1412864 | 16810.7 |
| dna-binding protein stpa | C3433_06675 | Not Available | Positive | 1413421 - 1413822 | 15188.3 |
| hypothetical protein | C3433_06680 | Not Available | Negative | 1413859 - 1414038 | 6385.57 |
| hypothetical protein | C3433_06685 | Not Available | Negative | 1414119 - 1414646 | 18543.7 |
| transcriptional regulator | C3433_06690 | Not Available | Negative | 1414656 - 1414955 | 10631.0 |
| yqae/pmp3 family membrane protein | C3433_06695 | Not Available | Positive | 1415274 - 1415432 | 5884.57 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

