Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor mpra | C3433_06595 | Not Available | Negative | 1399135 - 1399665 | 20527.6 |
| l-valine transporter subunit ygah | C3433_06600 | Not Available | Negative | 1399756 - 1400091 | 12035.3 |
| hypothetical protein | C3433_06605 | Not Available | Negative | 1400081 - 1400818 | 26108.1 |
| mfs transporter | C3433_06610 | Not Available | Negative | 1400941 - 1402125 | 41678.0 |
| proline/glycine betaine abc transporter substrate-binding protein prox | C3433_06615 | Not Available | Negative | 1402325 - 1403320 | 36288.1 |
| proline/glycine betaine abc transporter permease prow | C3433_06620 | Not Available | Negative | 1403415 - 1404479 | 37588.0 |
| proline/glycine betaine abc transporter atp-binding protein prov | C3433_06625 | Not Available | Negative | 1404472 - 1405674 | 44133.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | C3433_06635 | Not Available | Negative | 1406029 - 1406988 | 36151.4 |
| ribonucleotide-diphosphate reductase subunit alpha | C3433_06640 | Not Available | Negative | 1406999 - 1409143 | 80319.3 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | C3433_06645 | Not Available | Negative | 1409116 - 1409526 | 15203.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

