Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase transcriptional activator flha | C3433_06345 | Not Available | Negative | 1350345 - 1352423 | 78128.0 |
| hydrogenase expression/formation protein hype | C3433_06350 | Not Available | Negative | 1352595 - 1353605 | 35208.7 |
| hydrogenase formation protein hypd | C3433_06355 | Not Available | Negative | 1353602 - 1354723 | 41444.8 |
| hypc/hybg/hupf family hydrogenase formation chaperone | C3433_06360 | Not Available | Negative | 1354723 - 1354995 | 9783.68 |
| hydrogenase accessory protein hypb | C3433_06365 | Not Available | Negative | 1354986 - 1355858 | 31405.5 |
| hydrogenase maturation nickel metallochaperone hypa | C3433_06370 | Not Available | Negative | 1355962 - 1356333 | 13842.6 |
| transcriptional regulator | C3433_06375 | Not Available | Positive | 1356532 - 1356990 | 17594.7 |
| formate hydrogenlyase | C3433_06380 | Not Available | Positive | 1357134 - 1357745 | 21810.3 |
| formate hydrogenlyase subunit 3 | C3433_06385 | Not Available | Positive | 1357742 - 1359568 | 63920.9 |
| hydrogenase 3 membrane subunit | C3433_06390 | Not Available | Positive | 1359571 - 1360494 | 33040.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

