Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | C3433_06295 | Not Available | Negative | 1339783 - 1340700 | 33416.8 |
| hypothetical protein | C3433_06300 | Not Available | Negative | 1340883 - 1341656 | 28298.8 |
| porin | C3433_06305 | Not Available | Negative | 1341667 - 1342707 | 38969.4 |
| adenylosuccinate lyase family protein | C3433_06310 | Not Available | Positive | 1343115 - 1344485 | 50117.6 |
| murr/rpir family transcriptional regulator | C3433_06315 | Not Available | Negative | 1344532 - 1345425 | 34025.7 |
| transporter | C3433_06320 | Not Available | Positive | 1345779 - 1347146 | 47940.6 |
| nad-dependent malic enzyme | C3433_06325 | Not Available | Positive | 1347199 - 1348893 | 62282.8 |
| nitrous oxide-stimulated promoter family protein | C3433_06330 | Not Available | Positive | 1348979 - 1349323 | 13557.7 |
| hypothetical protein | C3433_06335 | Not Available | Positive | 1349328 - 1349861 | 17815.5 |
| transporter | C3433_06340 | Not Available | Negative | 1349872 - 1350300 | 14503.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

