Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | C3433_06245 | Not Available | Positive | 1329498 - 1331630 | 77719.1 |
| dna-binding response regulator | C3433_06250 | Not Available | Positive | 1331653 - 1332015 | 13174.8 |
| response regulator | C3433_06255 | Not Available | Positive | 1332029 - 1333705 | 62896.4 |
| chemotaxis protein | C3433_06260 | Not Available | Positive | 1333717 - 1334241 | 19374.5 |
| hypothetical protein | C3433_06265 | Not Available | Positive | 1334225 - 1334584 | 13143.9 |
| hypothetical protein | C3433_06270 | Not Available | Negative | 1334660 - 1336282 | 59369.3 |
| isochorismatase | C3433_06275 | Not Available | Negative | 1336377 - 1337099 | 26653.8 |
| iron abc transporter permease | C3433_06280 | Not Available | Negative | 1337263 - 1338114 | 30706.9 |
| metal abc transporter permease | C3433_06285 | Not Available | Negative | 1338111 - 1338968 | 30871.8 |
| manganese/iron transporter atp-binding protein | C3433_06290 | Not Available | Negative | 1338971 - 1339786 | 29830.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

