Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_06195 | Not Available | Positive | 1315063 - 1315338 | 9969.05 |
| hypothetical protein | C3433_06200 | Not Available | Negative | 1315422 - 1317356 | 71621.9 |
| hypothetical protein | C3433_06205 | Not Available | Negative | 1317366 - 1318064 | 26969.5 |
| abc transporter substrate-binding protein | C3433_06210 | Not Available | Negative | 1318061 - 1318954 | 33443.2 |
| amino acid abc transporter substrate-binding protein | C3433_06215 | Not Available | Negative | 1318938 - 1319870 | 34505.6 |
| diguanylate cyclase | C3433_06220 | Not Available | Negative | 1319863 - 1322055 | 82008.8 |
| diguanylate cyclase | C3433_06225 | Not Available | Positive | 1322667 - 1324859 | 83010.5 |
| methyl-accepting chemotaxis protein | C3433_06230 | Not Available | Positive | 1324923 - 1327013 | 75578.5 |
| protein-glutamate methylesterase | C3433_06235 | Not Available | Positive | 1327010 - 1328077 | 39194.9 |
| chemotaxis protein cher | C3433_06240 | Not Available | Positive | 1328074 - 1329486 | 54481.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

