Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_06145 | Not Available | Positive | 1294634 - 1294870 | 9173.04 |
| type i toxin-antitoxin system hok family toxin | C3433_06150 | Not Available | Positive | 1295164 - 1295316 | 5727.33 |
| dna mismatch repair protein muts | C3433_06155 | Not Available | Negative | 1295423 - 1297990 | 95567.8 |
| hypothetical protein | C3433_06160 | Not Available | Negative | 1298197 - 1298709 | 19047.8 |
| transcriptional regulator | C3433_06165 | Not Available | Negative | 1298709 - 1299494 | 29527.5 |
| transcriptional regulator | C3433_06170 | Not Available | Positive | 1299949 - 1300554 | 23386.4 |
| hlyd family type i secretion periplasmic adaptor subunit | C3433_06175 | Not Available | Negative | 1300596 - 1301969 | 51170.6 |
| type i secretion system permease/atpase | C3433_06180 | Not Available | Negative | 1301956 - 1304160 | 80451.5 |
| channel protein tolc | C3433_06185 | Not Available | Negative | 1304238 - 1305581 | 49898.9 |
| hypothetical protein | C3433_06190 | Not Available | Positive | 1305914 - 1315000 | 318607.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

