Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | C3433_06095 | Not Available | Positive | 1285949 - 1286644 | 25028.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | C3433_06100 | Not Available | Positive | 1286711 - 1287190 | 16868.6 |
| trna pseudouridine(13) synthase trud | C3433_06105 | Not Available | Positive | 1287187 - 1288236 | 39148.5 |
| 5'/3'-nucleotidase sure | C3433_06110 | Not Available | Positive | 1288217 - 1288978 | 27211.1 |
| protein-l-isoaspartate o-methyltransferase | C3433_06115 | Not Available | Positive | 1288972 - 1289598 | 23418.6 |
| murein hydrolase activator nlpd | C3433_06120 | Not Available | Positive | 1289716 - 1290843 | 39389.2 |
| rna polymerase sigma factor rpos | C3433_06125 | Not Available | Positive | 1290906 - 1291898 | 37934.9 |
| transcriptional regulator | C3433_06130 | Not Available | Negative | 1292041 - 1292445 | 15585.8 |
| phenolic acid decarboxylase | C3433_06135 | Not Available | Positive | 1292603 - 1293196 | 21611.4 |
| phenolic acid decarboxylase | C3433_06140 | Not Available | Positive | 1293196 - 1294623 | 52489.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

