Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | C3433_05895 | Not Available | Positive | 1242761 - 1243759 | 37490.9 |
| l-fuculose-phosphate aldolase | C3433_05900 | Not Available | Positive | 1243901 - 1244548 | 23881.8 |
| lactaldehyde reductase | C3433_05905 | Not Available | Positive | 1244576 - 1245724 | 40479.6 |
| flap endonuclease xni | C3433_05910 | Not Available | Negative | 1245805 - 1246560 | 28289.9 |
| hypothetical protein | C3433_05915 | Not Available | Positive | 1246549 - 1246731 | 6123.35 |
| l-serine ammonia-lyase | C3433_05920 | Not Available | Negative | 1246728 - 1248095 | 48833.0 |
| haaap family serine/threonine permease | C3433_05925 | Not Available | Negative | 1248149 - 1249438 | 46906.2 |
| log family protein | C3433_05930 | Not Available | Negative | 1250001 - 1251365 | 50845.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | C3433_05935 | Not Available | Negative | 1251479 - 1252327 | 32537.1 |
| secy-interacting protein | C3433_05940 | Not Available | Positive | 1252396 - 1252941 | 20403.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

