Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | C3433_05845 | Not Available | Positive | 1231416 - 1232516 | 41903.6 |
| transcriptional regulator | C3433_05850 | Not Available | Negative | 1232552 - 1233280 | 27205.6 |
| l-fucose mutarotase | C3433_05855 | Not Available | Negative | 1233345 - 1233767 | 15380.8 |
| l-fuculokinase | C3433_05860 | Not Available | Negative | 1233769 - 1235187 | 51848.1 |
| hypothetical protein | C3433_05865 | Not Available | Positive | 1235190 - 1235393 | 7402.23 |
| l-fucose isomerase | C3433_05870 | Not Available | Negative | 1235310 - 1237085 | 65100.5 |
| d-xylose abc transporter atp-binding protein | C3433_05875 | Not Available | Positive | 1237550 - 1239049 | 55217.0 |
| abc transporter permease | C3433_05880 | Not Available | Positive | 1239053 - 1240036 | 34543.0 |
| laci family transcriptional regulator | C3433_05885 | Not Available | Positive | 1240110 - 1241060 | 33519.2 |
| sugar kinase | C3433_05890 | Not Available | Positive | 1241114 - 1242694 | 56795.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

