Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1224945 - 1225021 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1225174 - 1225250 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1225285 - 1225361 | Not Available |
| murein transglycosylase a | C3433_05810 | Not Available | Positive | 1225567 - 1226664 | 40151.5 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C3433_05815 | Not Available | Positive | 1226773 - 1227579 | 28474.5 |
| cysteine desulfurase sulfur acceptor subunit csde | C3433_05820 | Not Available | Negative | 1227657 - 1228103 | 16080.4 |
| cysteine desulfurase csda | C3433_05825 | Not Available | Negative | 1228103 - 1229308 | 42909.3 |
| ygdi/ygdr family lipoprotein | C3433_05830 | Not Available | Positive | 1229501 - 1229728 | 8160.64 |
| transcriptional regulator gcva | C3433_05835 | Not Available | Positive | 1230092 - 1231009 | 34366.4 |
| hypothetical protein | C3433_05840 | Not Available | Positive | 1231028 - 1231423 | 14440.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

