Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type cleavage/methylation domain-containing protein | C3433_05745 | Not Available | Positive | 1208397 - 1208867 | 17903.5 |
| prepilin-type cleavage/methylation domain-containing protein | C3433_05750 | Not Available | Positive | 1208858 - 1209421 | 20794.0 |
| hypothetical protein | C3433_05755 | Not Available | Positive | 1209418 - 1209825 | 15010.3 |
| prepilin peptidase-dependent protein c | C3433_05760 | Not Available | Positive | 1209810 - 1210133 | 12499.4 |
| exodeoxyribonuclease v subunit gamma | C3433_05765 | Not Available | Positive | 1210153 - 1213521 | 129180.0 |
| pitrilysin | C3433_05770 | Not Available | Positive | 1213701 - 1216589 | 107453.0 |
| exodeoxyribonuclease v subunit beta | C3433_05775 | Not Available | Positive | 1216582 - 1220127 | 133238.0 |
| exodeoxyribonuclease v subunit alpha | C3433_05780 | Not Available | Positive | 1220124 - 1221953 | 66014.2 |
| amino-acid n-acetyltransferase | C3433_05785 | Not Available | Negative | 1222051 - 1223382 | 49415.5 |
| n-acetylmuramoyl-l-alanine amidase | C3433_05790 | Not Available | Positive | 1223617 - 1224870 | 45453.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

