Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | C3433_05640 | Not Available | Negative | 1184589 - 1184915 | 12163.6 |
| aspartate/glutamate racemase | C3433_05645 | Not Available | Positive | 1185057 - 1185749 | 25059.1 |
| pilin protein | C3433_05650 | Not Available | Negative | 1185889 - 1187013 | 40767.1 |
| fimbrial protein | C3433_05655 | Not Available | Negative | 1187010 - 1189709 | 98755.4 |
| fimbrial protein | C3433_05660 | Not Available | Negative | 1189786 - 1190280 | 17194.8 |
| fimbrial protein | C3433_05665 | Not Available | Negative | 1190309 - 1191016 | 26267.9 |
| lysr family transcriptional regulator | C3433_05670 | Not Available | Negative | 1191397 - 1192320 | 34399.9 |
| diaminopimelate decarboxylase | C3433_05675 | Not Available | Positive | 1192438 - 1193694 | 45781.8 |
| laci family transcriptional regulator | C3433_05680 | Not Available | Negative | 1193799 - 1194809 | 37087.4 |
| hth-type transcriptional regulator galr | C3433_05685 | Not Available | Negative | 1194823 - 1195851 | 37012.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

