Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | C3433_05485 | Not Available | Positive | 1151215 - 1152313 | 41210.0 |
| lysine--trna ligase | C3433_05490 | Not Available | Positive | 1152323 - 1153840 | 57674.7 |
| isopentenyl-diphosphate delta-isomerase | C3433_05495 | Not Available | Negative | 1153926 - 1154474 | 20402.1 |
| hypothetical protein | C3433_05500 | Not Available | Positive | 1154642 - 1155400 | 26580.0 |
| Trna-gly | Not Available | Not Available | Positive | 1155480 - 1155553 | Not Available |
| n-acetyltransferase | C3433_05510 | Not Available | Negative | 1155586 - 1156122 | 19950.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | C3433_05515 | Not Available | Positive | 1156966 - 1159428 | 92017.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase | C3433_05520 | Not Available | Positive | 1159438 - 1161459 | 76628.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | C3433_05525 | Not Available | Positive | 1161456 - 1162790 | 50944.8 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | C3433_05530 | Not Available | Positive | 1162787 - 1163293 | 19420.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

