Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asch domain-containing protein | C3433_05435 | Not Available | Positive | 1143855 - 1144166 | 12012.2 |
| hemolysin iii family protein | C3433_05440 | Not Available | Positive | 1144330 - 1144992 | 23881.2 |
| pp_01061 | C3433_05445 | Not Available | Negative | 1145123 - 1146106 | Not Available |
| molybdenum cofactor biosynthesis protein | C3433_05450 | Not Available | Positive | 1146146 - 1146373 | 8694.51 |
| fad assembly factor sdhe | C3433_05455 | Not Available | Positive | 1146363 - 1146629 | 10528.7 |
| hypothetical protein | C3433_05460 | Not Available | Positive | 1146610 - 1147017 | 15896.7 |
| flavodoxin fldb | C3433_05465 | Not Available | Negative | 1147116 - 1147637 | 19716.3 |
| site-specific tyrosine recombinase xerd | C3433_05470 | Not Available | Positive | 1147751 - 1148647 | 34170.1 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | C3433_05475 | Not Available | Positive | 1148671 - 1149384 | 25832.3 |
| single-stranded-dna-specific exonuclease recj | C3433_05480 | Not Available | Positive | 1149390 - 1151123 | 63167.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

