Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeca family protein | C3433_05385 | Not Available | Positive | 1131193 - 1131777 | 21402.1 |
| xaa-pro aminopeptidase | C3433_05390 | Not Available | Positive | 1131802 - 1133127 | 49468.9 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | C3433_05395 | Not Available | Positive | 1133124 - 1134302 | 42802.4 |
| fad-dependent 2-octaprenylphenol hydroxylase | C3433_05400 | Not Available | Positive | 1134442 - 1135644 | 44070.1 |
| glycine cleavage system protein t | C3433_05405 | Not Available | Positive | 1136097 - 1137191 | 40220.2 |
| glycine cleavage system protein h | C3433_05410 | Not Available | Positive | 1137217 - 1137606 | 13797.8 |
| glycine dehydrogenase (aminomethyl-transferring) | C3433_05415 | Not Available | Positive | 1137734 - 1140607 | 104341.0 |
| nad(p)-dependent oxidoreductase | C3433_05420 | Not Available | Positive | 1140685 - 1141428 | 25886.1 |
| 6-phospho-beta-glucosidase | C3433_05425 | Not Available | Negative | 1141520 - 1142953 | 55273.4 |
| murr/rpir family transcriptional regulator | C3433_05430 | Not Available | Negative | 1143074 - 1143802 | 27277.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

