Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt abc transporter permease | C3433_05275 | Not Available | Negative | 1111340 - 1112047 | 26736.3 |
| ecf transporter s component | C3433_05280 | Not Available | Negative | 1112048 - 1112626 | 20301.9 |
| duf296 domain-containing protein | C3433_05285 | Not Available | Negative | 1112651 - 1113076 | 15249.4 |
| erythrose 4-phosphate dehydrogenase | C3433_05290 | Not Available | Positive | 1113396 - 1113473 | 2998.49 |
| erythrose-4-phosphate dehydrogenase | C3433_05295 | Not Available | Positive | 1113451 - 1114479 | 37549.9 |
| phosphoglycerate kinase | C3433_05300 | Not Available | Positive | 1114519 - 1115682 | 41033.5 |
| class ii fructose-bisphosphate aldolase | C3433_05305 | Not Available | Positive | 1115771 - 1116850 | 39096.4 |
| mechanosensitive ion channel protein mscs | C3433_05310 | Not Available | Positive | 1117042 - 1117902 | 31129.1 |
| arginine exporter argo | C3433_05315 | Not Available | Positive | 1118113 - 1118748 | 23223.2 |
| oxidative stress defense protein | C3433_05320 | Not Available | Positive | 1118842 - 1119588 | 26706.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

