Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprt family zinc-dependent metalloprotease | C3433_05205 | Not Available | Negative | 1099054 - 1099551 | 19336.6 |
| sugar porter family mfs transporter | C3433_05210 | Not Available | Negative | 1099630 - 1101024 | 50933.6 |
| methionine adenosyltransferase | C3433_05215 | Not Available | Negative | 1101425 - 1102579 | 41902.9 |
| virulence promoting factor | C3433_05235 | Not Available | Positive | 1103478 - 1103609 | 4979.43 |
| biosynthetic arginine decarboxylase | C3433_05240 | Not Available | Positive | 1103618 - 1105594 | 73812.3 |
| agmatinase | C3433_05245 | Not Available | Positive | 1105832 - 1106752 | 33577.9 |
| metalloprotease | C3433_05255 | Not Available | Negative | 1106939 - 1107697 | 26629.7 |
| transketolase | C3433_05260 | Not Available | Positive | 1107977 - 1109968 | 71951.2 |
| abc transporter atp-binding protein | C3433_05265 | Not Available | Negative | 1110031 - 1110681 | 23762.5 |
| cobalt abc transporter atp-binding protein | C3433_05270 | Not Available | Negative | 1110675 - 1111352 | 25050.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

