Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xtp/ditp diphosphatase | C3433_05155 | Not Available | Negative | 1092151 - 1092744 | 20947.8 |
| yggu family protein | C3433_05160 | Not Available | Negative | 1092752 - 1093042 | 10419.8 |
| yggt family protein | C3433_05165 | Not Available | Negative | 1093039 - 1093605 | 21124.4 |
| yggs family pyridoxal phosphate-dependent enzyme | C3433_05170 | Not Available | Negative | 1093624 - 1094328 | 25621.7 |
| type iv pili twitching motility protein pilt | C3433_05175 | Not Available | Positive | 1094346 - 1095326 | 36020.5 |
| holliday junction resolvase ruvx | C3433_05180 | Not Available | Negative | 1095323 - 1095739 | 15121.1 |
| yqge/algh family protein | C3433_05185 | Not Available | Negative | 1095739 - 1096302 | 20796.2 |
| glutathione synthase | C3433_05190 | Not Available | Negative | 1096479 - 1097426 | 35456.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C3433_05195 | Not Available | Negative | 1097446 - 1098177 | 26943.7 |
| deoxyribonuclease i | C3433_05200 | Not Available | Negative | 1098252 - 1098959 | 26783.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

