Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | C3433_05050 | Not Available | Positive | 1070271 - 1072040 | 67834.4 |
| type vi secretion system baseplate subunit tssg | C3433_05055 | Not Available | Positive | 1072004 - 1073086 | 39651.7 |
| type vi secretion system lipoprotein tssj | C3433_05060 | Not Available | Positive | 1073122 - 1073646 | 19414.6 |
| type vi secretion system tip protein vgrg | C3433_05065 | Not Available | Positive | 1073651 - 1074838 | 45680.5 |
| dna helicase | C3433_05075 | Not Available | Positive | 1075654 - 1077147 | 56840.1 |
| hypothetical protein | C3433_05080 | Not Available | Positive | 1077137 - 1078765 | 59206.2 |
| recombinase xerd | C3433_05085 | Not Available | Positive | 1078883 - 1079899 | 39066.6 |
| Trna-phe | Not Available | Not Available | Positive | 1080122 - 1080197 | Not Available |
| hypothetical protein | C3433_05095 | Not Available | Negative | 1080303 - 1081010 | 24431.1 |
| hypothetical protein | C3433_05100 | Not Available | Negative | 1081102 - 1081287 | 6690.12 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

