Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_05000 | Not Available | Positive | 1053061 - 1054740 | 61952.9 |
| type vi secretion system tube protein hcp | C3433_05005 | Not Available | Positive | 1054743 - 1055234 | 18725.0 |
| type vi secretion system atpase tssh | C3433_05010 | Not Available | Positive | 1055398 - 1058070 | 98387.9 |
| type vi secretion system tip protein vgrg | C3433_05015 | Not Available | Positive | 1058067 - 1060424 | 86819.8 |
| hypothetical protein | C3433_05020 | Not Available | Positive | 1062398 - 1062757 | 13602.9 |
| tetratricopeptide repeat-containing protein | C3433_05025 | Not Available | Positive | 1062741 - 1063532 | 29463.9 |
| hypothetical protein | C3433_05030 | Not Available | Positive | 1063730 - 1063993 | 8734.75 |
| hypothetical protein | C3433_05035 | Not Available | Positive | 1063996 - 1065183 | 43326.2 |
| type vi secretion protein vask | C3433_05040 | Not Available | Positive | 1065191 - 1068547 | 124060.0 |
| type vi secretion system protein tssa | C3433_05045 | Not Available | Positive | 1068630 - 1070237 | 59869.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

