Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | C3433_04900 | Not Available | Negative | 1034446 - 1035657 | 45231.6 |
| ybhb/ybcl family raf kinase inhibitor-like protein | C3433_04905 | Not Available | Positive | 1035872 - 1036423 | 19318.7 |
| arac family transcriptional regulator | C3433_04910 | Not Available | Positive | 1036437 - 1037225 | 29484.1 |
| acylphosphatase | C3433_04915 | Not Available | Positive | 1037272 - 1037553 | 10347.4 |
| sulfurtransferase tuse | C3433_04920 | Not Available | Negative | 1037550 - 1037879 | 12466.1 |
| luxr family transcriptional regulator | C3433_04925 | Not Available | Negative | 1037950 - 1038501 | 21163.0 |
| phage tail protein | C3433_04930 | Not Available | Negative | 1038512 - 1039669 | 42293.1 |
| fimbrial protein | C3433_04935 | Not Available | Negative | 1039671 - 1042388 | 99744.9 |
| fimbrial protein | C3433_04940 | Not Available | Negative | 1042461 - 1042967 | 17900.5 |
| fimbrial protein | C3433_04945 | Not Available | Negative | 1043043 - 1043792 | 27784.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

