Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_04800 | Not Available | Negative | 1012258 - 1013364 | 40526.3 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | C3433_04805 | Not Available | Positive | 1013463 - 1015571 | 78965.3 |
| abc transporter atp-binding protein | C3433_04810 | Not Available | Positive | 1015584 - 1017491 | 72192.1 |
| paraquat-inducible protein a | C3433_04815 | Not Available | Positive | 1017507 - 1018760 | 46587.4 |
| paraquat-inducible protein b | C3433_04820 | Not Available | Positive | 1018765 - 1020405 | 60474.6 |
| hypothetical protein | C3433_04825 | Not Available | Positive | 1020402 - 1020965 | 20748.8 |
| ribosome modulation factor | C3433_04830 | Not Available | Positive | 1021222 - 1021389 | 6542.93 |
| beta-hydroxydecanoyl-acp dehydratase | C3433_04835 | Not Available | Negative | 1021556 - 1022074 | 18984.2 |
| lon protease | C3433_04840 | Not Available | Negative | 1022143 - 1023903 | 66044.7 |
| macrodomain ter protein matp | C3433_04845 | Not Available | Positive | 1024089 - 1024541 | 17812.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

