Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C3433_04590 | Not Available | Positive | 960106 - 961254 | 41539.4 |
| amino acid permease | C3433_04595 | Not Available | Positive | 961461 - 962882 | 52241.4 |
| pyruvate formate lyase-activating protein | C3433_04600 | Not Available | Negative | 963003 - 963743 | 28280.9 |
| formate c-acetyltransferase | C3433_04605 | Not Available | Negative | 964054 - 966336 | 85057.5 |
| formate transporter foca | C3433_04610 | Not Available | Negative | 966396 - 967373 | 35555.1 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C3433_04615 | Not Available | Negative | 967658 - 969418 | 65624.0 |
| duf421 domain-containing protein | C3433_04620 | Not Available | Positive | 969555 - 970247 | 26035.2 |
| phosphoserine transaminase | C3433_04625 | Not Available | Positive | 970460 - 971548 | 39763.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C3433_04630 | Not Available | Positive | 971618 - 972901 | 46007.2 |
| metalloprotease | C3433_04635 | Not Available | Positive | 973040 - 973801 | 26880.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

