Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2593 domain-containing protein | C3433_04475 | Not Available | Positive | 935138 - 935626 | 18492.2 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | C3433_04480 | Not Available | Positive | 935811 - 936938 | 41984.0 |
| Trna-ser | Not Available | Not Available | Positive | 937360 - 937447 | Not Available |
| amidohydrolase | C3433_04495 | Not Available | Negative | 937597 - 938274 | 24141.0 |
| quercetin 2,3-dioxygenase | C3433_04500 | Not Available | Negative | 938291 - 939151 | 31003.6 |
| lysr family transcriptional regulator | C3433_04505 | Not Available | Positive | 939260 - 940171 | 33857.3 |
| translation initiation factor if-1 | C3433_04510 | Not Available | Negative | 940251 - 940469 | 8236.07 |
| leucyl/phenylalanyl-trna--protein transferase | C3433_04520 | Not Available | Negative | 940753 - 941457 | 26687.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | C3433_04525 | Not Available | Negative | 941502 - 943223 | 62571.8 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | C3433_04530 | Not Available | Negative | 943224 - 944990 | 65076.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

