Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3433_04425 | Not Available | Positive | 927078 - 927458 | 14181.9 |
| glutaredoxin, grxa family | C3433_04430 | Not Available | Negative | 927493 - 927756 | 9863.75 |
| hypothetical protein | C3433_04435 | Not Available | Positive | 927929 - 928219 | 10469.3 |
| oxygen-insensitive nadph nitroreductase | C3433_04440 | Not Available | Positive | 928203 - 928925 | 26859.2 |
| 30s ribosomal protein s6--l-glutamate ligase | C3433_04445 | Not Available | Positive | 928985 - 929887 | 32538.6 |
| ybjn domain-containing protein | C3433_04450 | Not Available | Positive | 929979 - 930455 | 17564.0 |
| spermidine/putrescine abc transporter substrate-binding protein potf | C3433_04455 | Not Available | Positive | 930889 - 932001 | 40815.7 |
| polyamine abc transporter atp-binding protein | C3433_04460 | Not Available | Positive | 932140 - 933273 | 42143.5 |
| putrescine abc transporter permease poth | C3433_04465 | Not Available | Positive | 933283 - 934236 | 35602.8 |
| putrescine abc transporter permease poti | C3433_04470 | Not Available | Positive | 934233 - 935078 | 30708.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

