Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase | C3433_04375 | Not Available | Positive | 916583 - 917785 | 43502.3 |
| dna-binding transcriptional repressor deor | C3433_04380 | Not Available | Negative | 917831 - 918589 | 28505.4 |
| undecaprenyl-diphosphate phosphatase | C3433_04385 | Not Available | Negative | 918654 - 919262 | 22813.4 |
| multidrug transporter mdfa | C3433_04390 | Not Available | Positive | 919560 - 920792 | 44242.6 |
| hypothetical protein | C3433_04395 | Not Available | Negative | 921010 - 921291 | 9721.77 |
| had family hydrolase | C3433_04400 | Not Available | Negative | 921399 - 922214 | 30691.2 |
| mfs transporter | C3433_04405 | Not Available | Negative | 922214 - 923422 | 42083.3 |
| dna-binding transcriptional regulator | C3433_04410 | Not Available | Positive | 923508 - 924068 | 21168.7 |
| short-chain dehydrogenase | C3433_04415 | Not Available | Negative | 924055 - 924852 | 27084.7 |
| transporter | C3433_04420 | Not Available | Negative | 925122 - 926807 | 60133.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

