Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain S1284 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1319997 bp
Thymine Count
1331153 bp
Guanine Count
1434008 bp
Cytosine Count
1425788 bp
Genome Length
5511103 bp
Protein-coding Genes
4992 genes
Non-Coding Genes
277 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C3433_03970 | Not Available | Negative | 824606 - 825556 | 35816.7 |
| 4-oxalomesaconate tautomerase | C3433_03975 | Not Available | Positive | 825735 - 826787 | 37031.4 |
| hypothetical protein | C3433_03980 | Not Available | Positive | 826870 - 828303 | 51338.7 |
| hydratase | C3433_03985 | Not Available | Positive | 828373 - 830634 | 81455.3 |
| acyl-coa thioesterase | C3433_03990 | Not Available | Negative | 830689 - 831972 | 46073.0 |
| imidazolonepropionase | C3433_03995 | Not Available | Positive | 832197 - 833420 | 44746.5 |
| formimidoylglutamase | C3433_04000 | Not Available | Positive | 833417 - 834358 | 34266.6 |
| histidine utilization repressor | C3433_04005 | Not Available | Positive | 834446 - 835165 | 26947.2 |
| urocanate hydratase | C3433_04010 | Not Available | Positive | 835357 - 837042 | 61429.9 |
| histidine ammonia-lyase | C3433_04015 | Not Available | Positive | 837044 - 838564 | 53938.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

