Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP7129 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b,
Gene Summary
Adenine Count
80460 bp
Thymine Count
81374 bp
Guanine Count
110599 bp
Cytosine Count
108420 bp
Genome Length
380853 bp
Protein-coding Genes
337 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repa | CFBP7129_RS30435 | Not Available | Positive | 1 - 1218 | 44662.5 |
| plasmid partitioning protein repb | CFBP7129_RS30440 | Not Available | Positive | 1448 - 2458 | 36466.5 |
| plasmid replication protein repc | CFBP7129_RS30445 | Not Available | Positive | 2673 - 3992 | 48804.5 |
| recombinase family protein | CFBP7129_RS30450 | Not Available | Negative | 4001 - 4942 | 34788.0 |
| rhe_pe00001 family protein | CFBP7129_RS30455 | Not Available | Positive | 5224 - 6336 | 40678.9 |
| duf433 domain-containing protein | CFBP7129_RS30460 | Not Available | Positive | 6425 - 7015 | 21812.4 |
| type ii toxin-antitoxin system vapc family toxin | CFBP7129_RS30465 | Not Available | Positive | 7018 - 7464 | 16159.2 |
| phosphodiesterase | CFBP7129_RS30470 | Not Available | Positive | 7519 - 7831 | 11637.7 |
| recombinase family protein | CFBP7129_RS30475 | Not Available | Positive | 8061 - 8630 | 20649.2 |
| mfs transporter | CFBP7129_RS30480 | Not Available | Positive | 8712 - 9929 | 42107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


