Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP7129 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP7129
Gene Summary
Adenine Count
572800 bp
Thymine Count
563477 bp
Guanine Count
847455 bp
Cytosine Count
864678 bp
Genome Length
2848410 bp
Protein-coding Genes
2700 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repa | CFBP7129_RS30435 | Not Available | Positive | 1 - 1218 | 44662.5 |
| plasmid partitioning protein repb | CFBP7129_RS30440 | Not Available | Positive | 1448 - 2458 | 36466.5 |
| plasmid replication protein repc | CFBP7129_RS30445 | Not Available | Positive | 2673 - 3992 | 48804.5 |
| recombinase family protein | CFBP7129_RS30450 | Not Available | Negative | 4001 - 4942 | 34788.0 |
| rhe_pe00001 family protein | CFBP7129_RS30455 | Not Available | Positive | 5224 - 6336 | 40678.9 |
| duf433 domain-containing protein | CFBP7129_RS30460 | Not Available | Positive | 6425 - 7015 | 21812.4 |
| type ii toxin-antitoxin system vapc family toxin | CFBP7129_RS30465 | Not Available | Positive | 7018 - 7464 | 16159.2 |
| phosphodiesterase | CFBP7129_RS30470 | Not Available | Positive | 7519 - 7831 | 11637.7 |
| recombinase family protein | CFBP7129_RS30475 | Not Available | Positive | 8061 - 8630 | 20649.2 |
| mfs transporter | CFBP7129_RS30480 | Not Available | Positive | 8712 - 9929 | 42107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


