Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain Upstream_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1142509 bp
Thymine Count
1145473 bp
Guanine Count
1275806 bp
Cytosine Count
1275705 bp
Genome Length
4839493 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
304 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterobactin transporter ents | E5284_RS16790 | Not Available | Negative | 3476970 - 3478208 | 42892.4 |
| fe(3+)-siderophore abc transporter permease | E5284_RS16795 | Not Available | Positive | 3478319 - 3479326 | 34100.7 |
| iron-enterobactin abc transporter permease | E5284_RS16800 | Not Available | Positive | 3479323 - 3480315 | 35169.9 |
| iron-enterobactin abc transporter atp-binding protein | E5284_RS16805 | Not Available | Positive | 3480312 - 3481109 | 29245.5 |
| lps o-antigen length regulator wzz(fepe) | E5284_RS16810 | Not Available | Negative | 3481156 - 3482289 | 42012.9 |
| enterobactin non-ribosomal peptide synthetase entf | E5284_RS16815 | Not Available | Negative | 3482518 - 3486408 | 142177.0 |
| mbth family protein | E5284_RS16820 | Not Available | Negative | 3486405 - 3486623 | 8293.47 |
| enterochelin esterase | E5284_RS16825 | Not Available | Negative | 3486654 - 3487871 | 45610.0 |
| tonb-dependent siderophore receptor | E5284_RS16830 | Not Available | Positive | 3488124 - 3490379 | 82980.6 |
| enterobactin synthase subunit entd | E5284_RS16835 | Not Available | Positive | 3490429 - 3491082 | 23387.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

