Agrobacterium tumefaciens strain 1D1460

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain 1D1460 is a rod-shaped, Gram-negative bacterium that optimally grows at a temperature of 25.0°C and thrives in aerobic conditions. This strain is part of a diverse habitat, indicating its adaptability and potential versatility in various ecological niches. As an aerobic organism, A. tumefaciens strain 1D1460 requires oxygen for its metabolic processes, which may impact its distribution in environments where oxygen availability fluctuates. The rod shape of this bacterium is characteristic of many members within the Agrobacterium genus, facilitating its motility and interaction with its surroundings. The diverse habitat of strain 1D1460 suggests that it may play a role in various ecological functions, potentially including nutrient cycling and plant-microbe interactions. This adaptability may be particularly relevant in agricultural settings or natural ecosystems where it could contribute to the dynamics of microbial communities. Understanding the specific environmental parameters that support the growth of A. tumefaciens strain 1D1460 can provide insights into its ecological roles and potential applications in biotechnology, particularly in plant sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain 1D1460

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain 1D1460
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain 1D1460


Gene Summary

Adenine Count

46575 bp

Thymine Count

46246 bp

Guanine Count

61583 bp

Cytosine Count

59829 bp

Genome Length

214233 bp

Protein-coding Genes

192 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
plasmid partitioning protein repbAt1D1460_RS27120Not Available+1088 - 209836494.6
plasmid replication protein repcAt1D1460_RS27125Not Available+2313 - 363248721.4
recombinase family proteinAt1D1460_RS27130Not Available-3641 - 458234683.9
rhe_pe00001 family proteinAt1D1460_RS27135Not Available+4865 - 597440857.2
dead/deah box helicaseAt1D1460_RS27140Not Available-6155 - 866591970.2
hypothetical proteinAt1D1460_RS27145Not Available-8868 - 1005544855.6
hypothetical proteinAt1D1460_RS27150Not Available+10289 - 1100525737.1
res family nad+ phosphorylaseAt1D1460_RS27155Not Available+11098 - 1159818133.6
hypothetical proteinAt1D1460_RS27160Not Available+11601 - 1259335928.0
hypothetical proteinAt1D1460_RS27165Not Available+12594 - 1309418565.3

Displaying genes 1 – 10 of 4917 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites