Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
420112 bp
Thymine Count
420227 bp
Guanine Count
620310 bp
Cytosine Count
621221 bp
Genome Length
2081870 bp
Protein-coding Genes
1875 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repb | At1D1460_RS27120 | Not Available | Positive | 1088 - 2098 | 36494.6 |
| plasmid replication protein repc | At1D1460_RS27125 | Not Available | Positive | 2313 - 3632 | 48721.4 |
| recombinase family protein | At1D1460_RS27130 | Not Available | Negative | 3641 - 4582 | 34683.9 |
| rhe_pe00001 family protein | At1D1460_RS27135 | Not Available | Positive | 4865 - 5974 | 40857.2 |
| dead/deah box helicase | At1D1460_RS27140 | Not Available | Negative | 6155 - 8665 | 91970.2 |
| hypothetical protein | At1D1460_RS27145 | Not Available | Negative | 8868 - 10055 | 44855.6 |
| hypothetical protein | At1D1460_RS27150 | Not Available | Positive | 10289 - 11005 | 25737.1 |
| res family nad+ phosphorylase | At1D1460_RS27155 | Not Available | Positive | 11098 - 11598 | 18133.6 |
| hypothetical protein | At1D1460_RS27160 | Not Available | Positive | 11601 - 12593 | 35928.0 |
| hypothetical protein | At1D1460_RS27165 | Not Available | Positive | 12594 - 13094 | 18565.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


