Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | At1D1460_RS17630 | Not Available | Negative | 662015 - 663085 | 39058.7 |
| duf2934 domain-containing protein | At1D1460_RS28365 | Not Available | Positive | 663369 - 663626 | 9484.08 |
| sh3 domain-containing protein | At1D1460_RS17640 | Not Available | Negative | 663694 - 664500 | 31379.2 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | At1D1460_RS17650 | Not Available | Positive | 664757 - 665509 | 27896.5 |
| duf1178 family protein | At1D1460_RS17655 | Not Available | Negative | 665548 - 665976 | 15594.4 |
| carbon-nitrogen hydrolase family protein | At1D1460_RS17660 | Not Available | Negative | 665973 - 666833 | 30497.4 |
| glutaredoxin 3 | At1D1460_RS17665 | Not Available | Negative | 666864 - 667118 | 9190.87 |
| comf family protein | At1D1460_RS17670 | Not Available | Negative | 667179 - 667970 | 28322.4 |
| methyltransferase domain-containing protein | At1D1460_RS17675 | Not Available | Positive | 668114 - 668995 | 32201.6 |
| flp family type ivb pilin | At1D1460_RS17680 | Not Available | Negative | 669006 - 669200 | 6813.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


