Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | At1D1460_RS17525 | Not Available | Positive | 637998 - 638837 | 29946.1 |
| l-rhamnose catabolism isomerase | At1D1460_RS17530 | Not Available | Negative | 638996 - 640288 | 47000.2 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | At1D1460_RS17535 | Not Available | Negative | 640477 - 642573 | 76056.6 |
| deor/glpr family dna-binding transcription regulator | At1D1460_RS17540 | Not Available | Positive | 642774 - 643604 | 30106.2 |
| rhamnose abc transporter substrate-binding protein | At1D1460_RS17545 | Not Available | Positive | 643652 - 644662 | 34872.8 |
| sugar abc transporter atp-binding protein | At1D1460_RS17555 | Not Available | Positive | 644870 - 646405 | 55506.5 |
| abc transporter permease | At1D1460_RS17560 | Not Available | Positive | 646419 - 647420 | 34460.2 |
| abc transporter permease | At1D1460_RS17565 | Not Available | Positive | 647417 - 648427 | 35314.7 |
| l-rhamnose mutarotase | At1D1460_RS17570 | Not Available | Positive | 648431 - 648754 | 12355.0 |
| fggy-family carbohydrate kinase | At1D1460_RS17575 | Not Available | Positive | 648751 - 650133 | 49207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


