Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase family protein | At1D1460_RS17370 | Not Available | Positive | 606665 - 607813 | 42917.0 |
| sgnh/gdsl hydrolase family protein | At1D1460_RS17375 | Not Available | Positive | 607820 - 608449 | 21997.6 |
| abc transporter substrate-binding protein | At1D1460_RS17380 | Not Available | Positive | 608531 - 610129 | 59259.9 |
| abc transporter atp-binding protein | At1D1460_RS17385 | Not Available | Negative | 610629 - 611387 | 28118.2 |
| abc transporter atp-binding protein | At1D1460_RS17390 | Not Available | Negative | 611387 - 612223 | 30984.9 |
| abc transporter permease | At1D1460_RS17395 | Not Available | Negative | 612227 - 613114 | 31533.4 |
| abc transporter permease | At1D1460_RS17400 | Not Available | Negative | 613114 - 614136 | 37738.7 |
| lyse family translocator | At1D1460_RS17405 | Not Available | Positive | 614449 - 615084 | 22192.7 |
| fadr/gntr family transcriptional regulator | At1D1460_RS17410 | Not Available | Negative | 615112 - 615843 | 26467.6 |
| glxa family transcriptional regulator | At1D1460_RS17415 | Not Available | Negative | 615939 - 616925 | 36132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


