Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | At1D1460_RS17325 | Not Available | Negative | 594973 - 596568 | 57908.1 |
| duf3088 domain-containing protein | At1D1460_RS17330 | Not Available | Negative | 596609 - 596959 | 12665.3 |
| hypothetical protein | At1D1460_RS28360 | Not Available | Negative | 597097 - 597435 | 12167.7 |
| abc transporter substrate-binding protein | At1D1460_RS17335 | Not Available | Negative | 597401 - 598990 | 58271.2 |
| m20 aminoacylase family protein | At1D1460_RS17340 | Not Available | Negative | 599026 - 600225 | 42641.7 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS17345 | Not Available | Negative | 600317 - 601501 | 43544.9 |
| nmra family nad(p)-binding protein | At1D1460_RS17350 | Not Available | Negative | 601492 - 602388 | 31392.4 |
| abc transporter substrate-binding protein | At1D1460_RS17355 | Not Available | Negative | 602396 - 603463 | 38760.0 |
| ntaa/dmoa family fmn-dependent monooxygenase | At1D1460_RS17360 | Not Available | Positive | 603821 - 605128 | 48278.8 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS17365 | Not Available | Negative | 605212 - 606240 | 37528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


