Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | At1D1460_RS17275 | Not Available | Negative | 583255 - 584286 | 37691.9 |
| abc transporter substrate-binding protein | At1D1460_RS17280 | Not Available | Negative | 584397 - 586004 | 59016.3 |
| abc transporter permease | At1D1460_RS17285 | Not Available | Positive | 586276 - 587265 | 35238.2 |
| abc transporter permease | At1D1460_RS17290 | Not Available | Positive | 587262 - 588257 | 35439.7 |
| abc transporter atp-binding protein | At1D1460_RS17295 | Not Available | Positive | 588254 - 589252 | 36244.1 |
| abc transporter atp-binding protein | At1D1460_RS17300 | Not Available | Positive | 589230 - 590165 | 33994.1 |
| aldo/keto reductase | At1D1460_RS17305 | Not Available | Positive | 590184 - 591239 | 38707.7 |
| acyl-coa dehydrogenase family protein | At1D1460_RS17310 | Not Available | Positive | 591311 - 592549 | 44581.8 |
| lysr substrate-binding domain-containing protein | At1D1460_RS17315 | Not Available | Positive | 592587 - 593558 | 34824.0 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS17320 | Not Available | Negative | 593575 - 594927 | 50393.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


