Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | At1D1460_RS17125 | Not Available | Positive | 550736 - 551572 | 29537.6 |
| aspartate aminotransferase family protein | At1D1460_RS17130 | Not Available | Positive | 551587 - 552960 | 48913.4 |
| had-ia family hydrolase | At1D1460_RS17135 | Not Available | Positive | 553217 - 553930 | 26174.8 |
| abc transporter substrate-binding protein | At1D1460_RS17140 | Not Available | Positive | 554024 - 555634 | 57896.1 |
| abc transporter permease | At1D1460_RS17145 | Not Available | Positive | 555728 - 556678 | 34090.3 |
| abc transporter permease | At1D1460_RS17150 | Not Available | Positive | 556678 - 557529 | 30032.3 |
| abc transporter atp-binding protein | At1D1460_RS17155 | Not Available | Positive | 557529 - 559184 | 59831.5 |
| lrp/asnc family transcriptional regulator | At1D1460_RS17160 | Not Available | Negative | 559227 - 559703 | 18045.3 |
| nad(p)/fad-dependent oxidoreductase | At1D1460_RS17165 | Not Available | Positive | 559934 - 561259 | 47044.2 |
| nad(p)/fad-dependent oxidoreductase | At1D1460_RS17170 | Not Available | Negative | 561267 - 562418 | 41228.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


